CDS

Accession Number TCMCG017C25547
gbkey CDS
Protein Id OMO71807.1
Location complement(join(2861..3113,3329..3462,3538..3731,4171..4297,4423..4491,5531..5707,5797..5874,5973..6068,6224..6364))
GeneID InterPro:IPR000692
Organism Corchorus olitorius
locus_tag COLO4_28022

Protein

Length 422aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019732.1
Definition Fibrillarin [Corchorus olitorius]
Locus_tag COLO4_28022

EGGNOG-MAPPER Annotation

COG_category A
Description mediator of RNA polymerase II transcription subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14563        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000494        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008170        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0008276        [VIEW IN EMBL-EBI]
GO:0008649        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015030        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016074        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0016592        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0018364        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031126        [VIEW IN EMBL-EBI]
GO:0031167        [VIEW IN EMBL-EBI]
GO:0031428        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033967        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0034963        [VIEW IN EMBL-EBI]
GO:0036009        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042054        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043144        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0043628        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140102        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1990258        [VIEW IN EMBL-EBI]
GO:1990259        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGGGTGGGAGCAAGGTTGTAGTTGAGCCCCATAGACACGAGGGTGTTTTTGTTGCCAAGGGTAAAGAAGATGCTCTTGTTACTAAGAATATGGTCCCTGGTGAGGCTGTCTACAATGAAAAGAGGATTTCTGTTCAGAATGATGATGGGACTAAAGTTGAGTACAGGGTTTGGAATCCTTTCCGATCTAAGTTGGCAGCTGCAATTCTTGGTGGTGTTGATAATATATGGATTAAACCGGGTGCAAAGGTTCTCTACCTTGGAGCTGCTTCTGGTACCACCGTTTCTCACGTGTCCGATGTTGTTGGTCCTACTGGAGTGGTATATGCAGTAGAATTCTCTCACAGAAGTGGTAGAGACTTGGTCAACATGGCGAAGAAGCGAACAAATGTTATACCAATCATTGAAGACGCTAGGCATCCAGCCAAATACAGGATGCTAGTAGGCATGGTGGATGTCATATTTTCTGATGTTGCTCAGCCAGATCAGGCTAGGATTTTGGCCTTGAATGCATCATATTTTCTGAAGGCTGGAGGTCACTTTGTCATTTCAATCAAGGCTAACTGCATTGACTCCACCGTTTCAGCCGAACATGTTTTCCAGAGTGAAGTGAAGAAATTGCAACAGGAGCAATTCAGGCCCGCCGAGCAAGTCACTCTTGAACCATTTGAGCGTGACCATGCCTGTGGTCATTTGTTAAAATTTTACTCCAAGAAATGGGATTCAGTGAAGGGTGGATTCATTTTATACTTGTTGCATTACAACTGTATCCCATCCAGTTCTATCAATGGAGACCAGAGTCCTGCTATTCATCCTGTTTTGAAAGCTGAAGAGGAAGAACTTAGAAGTGGAATCAAGATTGCTAGGAATACTAGAGCTAAACTTTTGGAAGATTTCTGCAATATGACAGGTTTGAGTATCAATTTTGGGAAATCTGAAATTTTCTTCAATCCGGGTGGTTCATCACAAGACATCACTGATCTTTTTAATGGTGAAGGTTGTTCAGTCCCCTGGCAGACAATACTTGATGAGATGCTTAATCCAATCAAGGAATACGACTGGAGATTCTTCAACAAGTTCATCCTTTACAAAGACATCTTCAGCAGCATCTTGTTTTCAGCGTTTTACATGCCCTTAGTTTTTATTTGTCTAGATAGAGATGGCATGAAAGAGAGAAAAACTGATAAAGAAAATAAAGCTCAACACCAAAAAACCTTCTATCTCAATGTCCACGCATGGAAAACCAAACACGCTGTAAAAGGGTAG
Protein:  
MKGGSKVVVEPHRHEGVFVAKGKEDALVTKNMVPGEAVYNEKRISVQNDDGTKVEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVSAEHVFQSEVKKLQQEQFRPAEQVTLEPFERDHACGHLLKFYSKKWDSVKGGFILYLLHYNCIPSSSINGDQSPAIHPVLKAEEEELRSGIKIARNTRAKLLEDFCNMTGLSINFGKSEIFFNPGGSSQDITDLFNGEGCSVPWQTILDEMLNPIKEYDWRFFNKFILYKDIFSSILFSAFYMPLVFICLDRDGMKERKTDKENKAQHQKTFYLNVHAWKTKHAVKG